Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MDTKHLIASEIQKVVPDM---EQSTILSLLETPKNSSMGDLAFPAFSLAKTLRKAPQIIASDIAEQIKSDQ-FEKVEAVGPYVNFFLDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAE-------TDPSVDEEAREWFRKLEANDPEATELWQWFRDESLLEFNRLYDQMNVTFDSYNGEAFYN-DKMDEVLELLESKNLLVES-KGAQVVNLEKYGI-EHPALIKKSDGATLYITRDLAAALYRKRTYD-FAKSIYVVGNEQSAHFKQLKAVLKEMD-YDWSDDMTHVPFGLVTKGGAKLSTRKGNVILLEPTVAEAINRAASQIE---AKNPNLADKDKVAQAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKANFNPSNS----DNYSLNDVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYAHTRILDE--------DAEISSRLALCYATATVLKESLRLLGVDAPNEM |
| 1F7U Chain:A ((2-607)) | ASTANMISQLKKLSIAEPAVAKDSHPDVNIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPRLRIK-GANPKDLAVQWAEKFPCGDFLEKVEANGPFIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVSKESMLKAIDLFKEKGLTHEDK-GAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKY-HFDKMIYVIASQQDLHAAQFFEILKQMGF-EWAKDLQHVNFGMVQ----GMSTRKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGPYLQYAHSRLRSVERNASGITQEKWINADFSLLKEPAAKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLTPVERM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243680 for 4466 contacts (-54.6/contact) +
2D Compatibility (PS) -59106 + (NN) -25613 + (LL) 724
1D Compatibility (HY) -49600 + (ID) 9900
Total energy: -387175.0 ( -86.69 by residue)
QMean score : 0.546
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