Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKVQERRERKIKEAIKAKNWDEVTRLLQQEQSNAERRDRYHNRRIKDETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAEQGSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR
1YIO Chain:A ((136-186))
-------------------------------------------------------------------------------------LEQLFSSLTGREQQVLQLT-IRGLMNKQ----IA-GELGIAEVTVKVHRHNIMQKLNVRSLANL
General information:
TITO was launched using:
RESULT:
Template:
1YIO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6155 for 312 contacts (-19.7/contact) +
2D Compatibility (PS) -5398 + (NN) -2264 + (LL) 7784
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -8633.0 ( -27.67 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_1YIO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YIO-query.scw
PDB file :
Tito_Scwrl_1YIO.pdb
: