Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSITSVKKSKPFKLGVAGLLVGASLALPLSVSAASYTVKSGDTLSAIAKNHKTTVQELVSLNSIS----NADVISIGDVLKLDNSKASQAEAKSQPTIENSMNSSSNLSSSDSAAKEEIARRESNGSYTAQNGQYYGRYQLSQSYLNGDLSPENQEKVADNYVVSRYGSWSAALSFWNSNGWY |
| 2GU1 Chain:A ((8-60)) | ---------------------------------IHYMVKVGDTLSGIFAQLGVPYSILQKILSVDLDHLQLDMIQPGEELELMMDDMGQLSRLIYHMSIVEKAIYTRENDGSFSYDFQEISGEWREILFSGEINGSFSVSARRVGLTSSQVANITQVMKDKIDFSRSLRADRFDILVKQQYLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8481 for 258 contacts (-32.9/contact) +
2D Compatibility (PS) -5262 + (NN) -2653 + (LL) 2288
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -18508.0 ( -71.74 by residue)
QMean score : 0.682
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