Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSDLSDFYSHFFGNQGGNTD-KGLQVYGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVKIPSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKLKIPSNVTNGIVVASIQSGMPAQ-GKLKKYDVITKVDDKEVVSPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSKDLAKQRANN |
1TE0 Chain:A ((43-353)) | --------------------------------------------------TPASYNLAVRRAAPAVVNVYNRGLNT-------------------NSHNQLEIRTLGSGVIMDQ---RGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLIIKATGGLPTIPINARRVPHIGDVVLAIGNPYNLG--QTITQGIISATGRIGLNP-----TGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKS-------NDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLH---AQGGGID--QLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPAT-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TE0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104479 for 2463 contacts (-42.4/contact) +
2D Compatibility (PS) -33214 + (NN) -10091 + (LL) 3524
1D Compatibility (HY) -17200 + (ID) 5050
Total energy: -166510.0 ( -67.60 by residue)
QMean score : 0.513
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