Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------MKQRIIDELKRIEQSYGVKIVYAVESGSRAWGFPSQDSDYDVRFIYVPKKEWYFSI--EQERDVIEEPIH-----DL-LDISGWELRKTLRLFKKSNPPLLEWLSSDIVYYEAFTT--AEQLRKLRTEAFKPEA------SVYHYINMARRNVKDYLQGQEVKIKKYFYVLR-----------PILACQWIEKHGTIPPMDFTVLMNELVAEPELKAEMETLLER----KRRGEELD-----------LEARIDVIHQFIETEIERIMEAAKELKAEKKDMTSELNRLLLNTVEEVWKDGGS---------
3OPY Chain:I ((5-351))DSIIRDLERENVGPEFGEFLNTLQTDLNSEKPPIEQVKSQLETHFNLAHETQEFSRKNDNAPVDKLLTNYYNNYEVNVLEFVLQMGFSRDLSIPLNVWFVLDMISQLSTSKQDLP--LDYYLVLNNSQTGKYSDFVRYLIYEAVGAEIHLANRGPIRGNVGAGDRKITFHLLCKKTARMILVGDDRETDFEMSDRSFVTLLLDYYQRVGTTKKIDLLLLTNNFDTNMNNKLQQLKILESLNMLKSNCYVLDYQITVDQVTANFNSYVEGIPAFRRHEIANFLKKRKTPKNADELIFKYVGRWNICYQKKFHQGNISIHQISGYLD


General information:
TITO was launched using:
RESULT:

Template: 3OPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 1096 -66552 -60.72 -257.95
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain I : 0.63

3D Compatibility (PKB) : -60.72
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.133

(partial model without unconserved sides chains):
PDB file : Tito_3OPY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OPY-query.scw
PDB file : Tito_Scwrl_3OPY.pdb: