Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKKVTDTVQEMAQPIVDSLQLELVDIEFVKEGQSWFLRVFIDSDDGVDIEECAKVSEALSEKLDEADPISQNYFLEVSSPGAERPLKKKADFEKSLGKNVYIKTYEPIDGVKVFEGELAEFDGQTVTVEITIKTRKKRINIPYEKIANARLAVTF
4F7U Chain:G ((7-37))------------------------------------------------------------------------------------------PELKKFMDKKLSLKLNG---G-RHVQGILRGFDPF-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4F7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 44 -4824 -109.64 -155.61
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain G : 0.57

3D Compatibility (PKB) : -109.64
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.714

(partial model without unconserved sides chains):
PDB file : Tito_4F7U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F7U-query.scw
PDB file : Tito_Scwrl_4F7U.pdb: