Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPLKSHTGKAAVLNRINVDTDQIIPKQFLK-RIERT----GYGRFAFFDWRYDANGEPNPEFELNQP--------VYQGASILIAGENFGCGSSREHAPWA------------LDDYGFKIIIAPSFADIFHQNCFKNGMLPIRMPYDNWKQLVGQYENQSLQMTVDLENQLIHD-SEGNQIS-F-EVDPHWKEMLINGYDEISLTLLLEDEIKQFESQRSSWLQA
1L5J Chain:A ((164-343))----EKLTVTVFKV-TGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIE--------PDQPGVVGPIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGGKIAPIFFNTMEDAGALPIEVDV---S----NL-NMGDVIDVYPYKGEVRNHETGELLATFELKTDVLIDEVRAGG--------------------------


General information:
TITO was launched using:
RESULT:

Template: 1L5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 777 -209 -0.27 -1.38
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -0.27
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.356

(partial model without unconserved sides chains):
PDB file : Tito_1L5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L5J-query.scw
PDB file : Tito_Scwrl_1L5J.pdb: