Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIKTISGAERLSLKRSIDAGTEEQRKTVRSIIEDVKANGDQAVRSYTAKFDCIEID------SP-LVTKEE--FEEAYTSLDSRLLQVIRQA-IENIREYHERQLQSSWFYHRKDGTMLGQKVTALDSAGVYV--PGGTAAYPSSV-LMN-------VIPALVAGVE----RIVLVTPPGKDGLLSPGVLVAAAEL-----GIKDIYKMGGAQAIAALAYGTETIEPVDKITGPGNIYVALAKREVFGDVDIDMIAGPSEIVVLADETAIPSEIAADLLSQA-EHDKLSSCVFVT-DSMALAETVSAEVNKQLETLPRREIAEASVRDYGCIYVAETMVEAIETVNTLAPEHLEI-ITQSPEALLGSIKHAGAIFLGRYSPEPVGDYFAGPNHVLPTNGTARFSSPLNVTDFQKKSS-I-ISYSQSAFEEHAESIAAFARLEGLEAHARSIEARERRISK-
4MTN Chain:A ((5-406))----------GNEVLRIVDSIHRDKSIDKEIVFEGVEQAILSAARKHFGEEEVIEVHIDRTSGQPMVKTNGREIDRDELGDILGRISAQTKQVMIQKIREAERDTLFDE--YAQLRGQIVSGTVTRNEGSAITVNIGKAEAILPRSEMIPGESHRPNERIRAVVLEVKKMGPRVRVVLSRAHPDFVRRLLELEIPEVNERIIEIRSLAREAGYRTKVAVSCADSNIDPVGACVGVRGARIRNVGEELGGE-RIEVVRWNDS--------------LQVLVPNAMQPSEVEDVILCPML-------------GRVLVLVRDDQLSLAIGKRG---------QNVRLASKLVGWDIDVMTREELDQQLDQAVVAYSQIPG--VSEELAEGLVSQG----------FLSFEDLSVIEPDELMEMGSLTQEQADVIVEYAERESERIEKEQDLRRATEKAERQSQE


General information:
TITO was launched using:
RESULT:

Template: 4MTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1625 70636 43.47 192.99
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 43.47
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.286

(partial model without unconserved sides chains):
PDB file : Tito_4MTN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MTN-query.scw
PDB file : Tito_Scwrl_4MTN.pdb: