Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MTNDKMLARIAA------LLRQAEGTDNPHEA--DAFMSTAQRLATAASIDLAVARS---HAGNRSPAQAPTQRTITIGAA---GTRG---LRTYVQLFVLIAAANDVR-CDVASNSTFVYAYGFAED---IDTSHALYASLVVQMVRASDAYLASGAHRPTPTITARLNFQLAFGARVGQRLADAREQTRQEATKDRDRPPGTAIALRDKDIELHEYYRRSSKARGAWRASRATAGYS------------SAARRAGDRAGRQARLGNNPELPGARAALGR |
| 2YN5 Chain:A ((1-283)) | TPPNAPVVTYSDIVNDLIIMQGTAEAKSQLIITDSEGNTYTLTVPDNGKWSMAIPYPSEGKFTITSVDAIGNRSDDVPLDIMKEVPVISLSPDSDSGTVGDNITRDKQPTFIIGNLESDVVVVQVDINGTVYNAEKNADGVWFFTPGTPLADGSYTISVIASDA---AGNQKNSLPITVTIDSTLTV-PEIALAAGEDNGASDSDNVTNHTQPKFTLQHI-DADVTGVTVNVTHNGVTDIYQATQGADGWTFTPPAAWNDGNYTLSVTVVDRAG------NSQQSASLAVTVDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22847 for 1561 contacts (-14.6/contact) +
2D Compatibility (PS) -23813 + (NN) 7980 + (LL) 808
1D Compatibility (HY) -5200 + (ID) 2050
Total energy: -45122.0 ( -28.91 by residue)
QMean score : 0.111
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