Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSTNNLTPSSLREAFGHFPTGVVAIAAEVDGVRQGLAASTFVPVSLEPPLVSFCVQNTSTTWPKLTGVPMLGISVLGEAHDAAVRTLAAKTGDRFAGLETVSNDAGAVFIKGTSVWLESAIEQLVPAGDHTIVVLRVNQVKVDPNVAPIVFHRSVLRRLGV
1RZ1 Chain:A ((1-152))
------MDDRLFRNAMGKFATGVTVITTELNGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQKVLSMNFAGQL-EKPVDVQFE-ELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKIT-EQDPLLFFSGKYHQLA-
General information:
TITO was launched using:
RESULT:
Template:
1RZ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108219 for 1116 contacts (-97.0/contact) +
2D Compatibility (PS) -16936 + (NN) -6897 + (LL) -156
1D Compatibility (HY) -10000 + (ID) 1800
Total energy: -144008.0 ( -129.04 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_1RZ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RZ1-query.scw
PDB file :
Tito_Scwrl_1RZ1.pdb
: