Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEDRTGHQGISGPATRAIHAGYRPDPATGAVNVPIYASSTFAQDGV--GGLR-----GGFEYARTGNPTRAALEASLAAVEEGAFARAFSSGMAATDCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTRWDVQYTPVRLADLDAVGAAITPRTRLIWVETPTNPLLSIADITAIAEL--GTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAF-LQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHSENACAVAEFLADHPSVSSVLYPGLPSHPGHEIAARQMRGFGGMVSVRMRAGRRAAQDLCAKTRVFILAESLGGVESLIEHPSAMTHASTAGSQLE---VPDDLVRLSVGIEDIADLLGDLEQALG |
5DX5 Chain:B ((8-395)) | ------------GFATKAIHGGHIGDKQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAASGMGAIAASLWSALKSGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDVSNLDEVKNALKPNTKVVYLETPANPTLKVTDIRKISNMVHESNKECFVFVDNTFCTPYIQRPLELGADVVVHSATKYLNGHGDVIAGFAVGKEEFINQVKLFGIKDMTGSVTGPFESFLIIRGMKTLQLRMEKHCKNAMEVAKFLESHPAVEKVYYPGLESFKYYQLAREQMKLPGAMISFELKGGVEEGKIVMNNVKLATLAVSLGDSETLIQHPASMTHSPYTAEERKAAGISDGLVRLSVGLEDAEDIIDDLKQAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DX5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191294 for 3361 contacts (-56.9/contact) +
2D Compatibility (PS) -41780 + (NN) -26109 + (LL) 184
1D Compatibility (HY) -30800 + (ID) 8200
Total energy: -297999.0 ( -88.66 by residue)
QMean score : 0.516
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