Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTDRRAYS-CWPVPGGDIALMAARAAR-------GGVMLRQVS--ALDRMKAIVAQAVLDHVTDEEYLRELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTE-TDD----------------RLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEV-FGAGGYPQMLLRVGWAPINADPLPPTPRRELSQVVEWPEELLRQRC |
| 1YWQ Chain:A ((3-200)) | ----------------------------------------------------------------------------------------------------------ATTTNLKEAIVNRRSIRK-VTKNDAITKERIEEVLKTALHAPTSFNMQSGRMVVLMDGEHEKFWDIVKETLRARVPAENFEATVE-----------------------------------------RLKGFHAGVGTVLFFEDQATVEKMQENAPLYKDQFPFWSHQGNAMLQHTVWMLLSAEGIGASLQHYNPIVD---AEVKETWNIPAEWSLVGQMPFGEPNE---QPAERTFLPTEDVVKFY-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84230 for 1204 contacts (-70.0/contact) +
2D Compatibility (PS) -18366 + (NN) -8597 + (LL) 8084
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -106259.0 ( -88.25 by residue)
QMean score : 0.301
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