Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLDLLAMRESYTRQRILLCFNGPISRSLIEEIGHALRNYLHAEQAKPSEAMDVFAVYIEMTQNIRHYANLKGYGEHEAAATVAIARNEDGHYVVSAGNLVERDDGQSLVRSIQAIANLDKAALKAAYKEQLRRPRDSGCASGAGLGLLDIARKSSEPLAASLKEQPDGRAFFSLRAVI |
| 1VK5 Chain:A ((36-156)) | GSLLRRAEMYQDYMKQVPIPTNRGSLIP---------------------------FTSWVGLSISMKQLY-----GQPLHYLTNVLLQRWDQ----------SRFGTDSEEQRLDSIIHPTKAEATIWLVEEIHRLT-----------------PSHLHMALLWRSDPMYHSFIDPIFPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18437 for 810 contacts (22.8/contact) +
2D Compatibility (PS) -12988 + (NN) -5257 + (LL) 3524
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: 1116.0 ( 1.38 by residue)
QMean score : 0.286
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