Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPWLERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCFGGMSIAAGLCSYVLVTRE-ARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGE-QRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT |
3IAV Chain:A ((35-258)) | ----RAVEKQHAKGKLTARERIDLLLDEGSFVELDE-FARHRSTNFG-LDANRPYGDGVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALK-----TGCPVVGINDSGGARIQEGVASLGAYGEIFRRNTHASGVIPQISLVVGP--CAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGED-VGFEE------LGGARTHNSTSGVAHHMAGDEKDAVEY-VKQLLSYLPSNNLSEPPAFPEEADLAVTDEDAELDTIVPDSANQPYDMHSVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107459 for 1876 contacts (-57.3/contact) +
2D Compatibility (PS) -24678 + (NN) -12604 + (LL) 548
1D Compatibility (HY) -6400 + (ID) 3100
Total energy: -153693.0 ( -81.93 by residue)
QMean score : 0.394
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