Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGV-PRFLKGQGQGWLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASITGATVALIDALAVLKKRGALKGNPLKQMVAAVSVGIYQGVPVLDLDYLEDSAAETDLNVVMTDAGG---FIEVQGTAEGAPFRPAELNAMLELAQQGMQELFELQRAALAE
2PO1 Chain:A ((17-236))
--RIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDR-----RSIEISKVIKGALEPALILEMFPRTAIDVFIEVLQADAGTRVAGITAASLALADA-----------GIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTKDEFIEA-----VKLAIKGAKAVYQKQREALKE
General information:
TITO was launched using:
RESULT:
Template:
2PO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120397 for 1928 contacts (-62.4/contact) +
2D Compatibility (PS) -23921 + (NN) -11141 + (LL) 1476
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -172983.0 ( -89.72 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_2PO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PO1-query.scw
PDB file :
Tito_Scwrl_2PO1.pdb
: