Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG
3LR7 Chain:A ((1-151))
-GLSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGDFGADAQGAMTKALELFRNDIAAKYKELGF--
General information:
TITO was launched using:
RESULT:
Template:
3LR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71522 for 1106 contacts (-64.7/contact) +
2D Compatibility (PS) -16526 + (NN) -11311 + (LL) 156
1D Compatibility (HY) -17200 + (ID) 6650
Total energy: -123053.0 ( -111.26 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3LR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LR7-query.scw
PDB file :
Tito_Scwrl_3LR7.pdb
: