Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLVLAVLLTVGAAQEGISSRALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
4BP2 Chain:A ((8-128))
----------------------ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYKQAKKLDSCKVL------NNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLDKK---
General information:
TITO was launched using:
RESULT:
Template:
4BP2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66120 for 823 contacts (-80.3/contact) +
2D Compatibility (PS) -12234 + (NN) -5815 + (LL) 2548
1D Compatibility (HY) -16000 + (ID) 4750
Total energy: -102371.0 ( -124.39 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_4BP2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BP2-query.scw
PDB file :
Tito_Scwrl_4BP2.pdb
: