Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGG---NCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKK--QTWTVQNNGHSVMMLLENKASISGGGLPAPYQAKQLHLHWSDLPY-KGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDK---EQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
| 4HT2 Chain:A ((3-262)) | ---------------------KWTYFGPD--------GENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQG--LQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDL-YPDASTASNKSEGLAVLAVLIEMGSF-NPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPE--RTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFS-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HT2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94153 for 2028 contacts (-46.4/contact) +
2D Compatibility (PS) -26807 + (NN) -7175 + (LL) 3992
1D Compatibility (HY) -19600 + (ID) 4400
Total energy: -148143.0 ( -73.05 by residue)
QMean score : 0.345
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