Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGEAPQEPQS
4BG6 Chain:B ((2-230))
-DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS----------------
General information:
TITO was launched using:
RESULT:
Template:
4BG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72891 for 1825 contacts (-39.9/contact) +
2D Compatibility (PS) -24821 + (NN) -11192 + (LL) 196
1D Compatibility (HY) -26400 + (ID) 8400
Total energy: -143508.0 ( -78.63 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4BG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BG6-query.scw
PDB file :
Tito_Scwrl_4BG6.pdb
: