Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE
2DG9 Chain:A ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGLEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
2DG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50879 for 785 contacts (-64.8/contact) +
2D Compatibility (PS) -11983 + (NN) -5812 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 5150
Total energy: -87216.0 ( -111.10 by residue)
QMean score : 0.780
(partial model without unconserved sides chains):
PDB file :
Tito_2DG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DG9-query.scw
PDB file :
Tito_Scwrl_2DG9.pdb
: