Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES
2H29 Chain:A ((1-188))
MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYE-
General information:
TITO was launched using:
RESULT:
Template:
2H29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132490 for 1450 contacts (-91.4/contact) +
2D Compatibility (PS) -20805 + (NN) -14620 + (LL) -28
1D Compatibility (HY) -18800 + (ID) 3550
Total energy: -190293.0 ( -131.24 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_2H29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H29-query.scw
PDB file :
Tito_Scwrl_2H29.pdb
: