Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEECWVTEIANGSKDGLDSNPMKDYMILSGPQKTAVAVLCTLLGLLSALENVAVLYLILSSHQLRRKPSYLFIGSLAGADFLASVVFACSFVNFHVFHGVDS---KAVFLLKIGSVTMTFTASVGSLLLTAIDRYLCLRYPPSYKAL---LTRGRALVTLGIMWVLSALVSYLPLMGWTCCP--RPCSELFPLIPNDYLLSWLLFIAFL-FSGIIYTYGHVLWKAHQHVASLSGHQDR----------------------------------------------------------------------------------------------------------------------------------------------------QVPGMARMRLDVRLAKTLGLVLAVLLICWFPVLALMAHSLATTLSDQVKKAFAFCSMLCLINSMVNPVIYALRSGEIRSSAHHCLAHWKKCVRGLGSEAKEEAPRSSVTETEADGKITPWPDSRDLDLSDC |
| 3PBL Chain:A ((41-472)) | -----------------------------------YALSYCALILAIVFGNGLVCMAVLKERALQ-TTTNYLVVSLAVADLLVATL-VMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSISN----PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233901 for 2058 contacts (-113.7/contact) +
2D Compatibility (PS) -27738 + (NN) -10784 + (LL) 3708
1D Compatibility (HY) -18000 + (ID) 2900
Total energy: -289615.0 ( -140.73 by residue)
QMean score : 0.289
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