Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFISYVTALLGNSLLIFIILTKRSLHEPMYLFLCMLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHSTFISESGILLVMAFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPIIFLL---KRLTFCQNNIIPHTFCEHIGLAKYACNDIRINIWYGFSILMSTVV-LDVVLIFISYMLILHAVFHMPSPDACHKALNTFGS---------HVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCILAPPML--------NPIIYGIKTKQIQEQVVQFLFIKQK |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGP-----MEWIPSIMEDAMYIAKKL-RDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGD-------TLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGN---LRRALKFAKEIQN-IHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -340589 for 2334 contacts (-145.9/contact) +
2D Compatibility (PS) -29834 + (NN) 4030 + (LL) 1616
1D Compatibility (HY) -6000 + (ID) 2300
Total energy: -373077.0 ( -159.84 by residue)
QMean score : 0.185
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