Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MMASERNQSSTPTFI--------LLGFSEYPEIQVPLFL----------VFLFVYTVTVVGNLGMIIIIRLNSKLHTIMCFFLSHLSLTDF--CFSTVVTPKLLENLVVEYRTISFSGCIMQFCFACIFGVTETFMLAA---------------------MAYDRFVAVCKPLLYTTIMSQKLCALLVAGS-----------------YTWGIVCSLILTYFLLDLSFCESTFINNFICDHSVIVSASYSDP--------YISQRLCFIIAIFNEVSSLIIILTSYMLIFTTIMKMRSASGRQKTFSTCASHLTAITIFHGTILFLYCVPNPKTSSLIVTVASVFYTVAIPMLNPLIYSLRNKDINNMFEKLVVTKLIYH |
| 1BGY Chain:C ((1-379)) | MTNIRKSHPLMKIVNNA-FIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMMFRPLSQCLFWALVADLLTLTWIGGQPVEHPYITIGQLASVLYFLLILVLMPTAGTIENKLLKW------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231491 for 2111 contacts (-109.7/contact) +
2D Compatibility (PS) -29975 + (NN) -1491 + (LL) 1804
1D Compatibility (HY) -15200 + (ID) 2500
Total energy: -278853.0 ( -132.10 by residue)
QMean score : 0.190
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