Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLTDRNTSGTTFTLLGFSDYPELQVPLFLVFLAIYNVTVLGNIGLIVIIKINPKLHTPMYFFLSQLSFVDFCYSSIIAPKMLVNLVVKDRTISFLGCVVQFFFFCTFVVTESFLLAVMAYDRFVAICNPLLYTVNMSQKLCVLLVVGSYAWGVSCSLELTCSALKLCFHGFNTINHFFCEFSSLLSLSCSDTYINQWLLFFLATFNEISTLLIVLTSYAFIVVTILKMRSVSGRRKAFSTCASHLTAITIFHGTILFLYCVPNSKNSRHTVKVASVFYTVVIPMLNPLIYSLRNKDVKDTVTEILDTKVFSY |
1FJ2 Chain:A ((3-231)) | MDPEFMSTPLPAIV------PAARKATAAVIFLHGLGDT-------------GHGWAEAFAGIR--SSHIKYICPH--AP---------VRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTAL-TTQQKLAG-----------------------------------------VTALSCWLPLRASFPQGPIGGANRD---------ISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSS-CQQEMMDVKQFIDKLLPPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -295044 for 1983 contacts (-148.8/contact) +
2D Compatibility (PS) -22682 + (NN) 10994 + (LL) 7340
1D Compatibility (HY) 3600 + (ID) 1400
Total energy: -297192.0 ( -149.87 by residue)
QMean score : 0.179
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