Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTLLPPALLTCWLLAPVNSIHPECRFHLEIQEEETKCAELLRSQTEKHKACSGVWDNITCWRPANVGETVTVPCPKVFSNFYSKAGNISKNCTSDGWSETFPDFVDACGYSDPEDESKITFYILVKAIYTLGYSVSLMSLATGSIILCLFRKLHCTRNYIHLNLFLSFILRAISVLVKDDVLYSSSGTLHCPDQPSSWVGCKLSLVFLQYCIMANFFWLLVEGLYLHTLLVAMLPP----RRCFLAYLLIGWGLPTVCIGAWTAARL-YL---EDTGCWDTND--HS-----VPWW----VIRIPILISIIVNFVLFISIIRILLQKLTSPDVGGNDQSQYKRLAKSTLLLIPLFGVHYMVFAVFPIS----IS------------SKYQILFELCLGSFQGLVVAVLYCFLNSEVQCELKRKWRSRCPTPSASRDYRVCGSSFSRNGSEGALQFHRGSRAQSFLQTETSVI
2LNL Chain:A ((43-322))------------------------------------------------------------------------------------------------------------------------------IIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAAS--KVN------GWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVM----LFCYGFTLRTLFKAH---------MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -196071 for 1689 contacts (-116.1/contact) +
2D Compatibility (PS) -24448 + (NN) -5454 + (LL) 9296
1D Compatibility (HY) -19200 + (ID) 1650
Total energy: -237527.0 ( -140.63 by residue)
QMean score : 0.308

(partial model without unconserved sides chains):
PDB file : Tito_2LNL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LNL-query.scw
PDB file : Tito_Scwrl_2LNL.pdb: