Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GPAGCQDDVVALNEACYQYVQKGAPTVPPSQECCDAVKSVDVPCVCSYLGSPGVRDNISMEKVFYVSQQCGVSIPGNCGGSMV
M043 Chain:A ((1-109))
GPAGCQDDVVALNEACYQYVQKGAPTVPPSQECCDAVKSVDVPCVCSYLGSPGVRDNISMEKVFYVSQQCGVSIPGNCGGSMV
General information:
TITO was launched using:
RESULT:
Template:
M043.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48575 for 584 contacts (-83.2/contact) +
2D Compatibility (PS) -8810 + (NN) -7086 + (LL) 0
1D Compatibility (HY) -12800 + (ID) 4150
Total energy: -81421.0 ( -139.42 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_M043.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M043-query.scw
PDB file :
Tito_Scwrl_M043.pdb
: