Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGACGKTSPDQEAMKLAPCAMAAQDAKAAVSDSCCTQVRSIGQNPSCLCAVMLSDMAKASGIKAEIAITIPKRCNIANRPVGYKCGDYTLP
M043 Chain:A ((6-150))
AGACGKTSPDQEAMKLAPCAMAAQDAKAAVSDSCCTQVRSIGQNPSCLCAVMLSDMAKASGIKAEIAITIPKRCNIANRPVGYKCGDYTLP
General information:
TITO was launched using:
RESULT:
Template:
M043.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1812 for 627 contacts (-2.9/contact) +
2D Compatibility (PS) -8013 + (NN) 4040 + (LL) 0
1D Compatibility (HY) 3200 + (ID) 300
Total energy: -2885.0 ( -4.60 by residue)
QMean score : 0.026
(partial model without unconserved sides chains):
PDB file :
Tito_M043.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M043-query.scw
PDB file :
Tito_Scwrl_M043.pdb
: