Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSAAKCKEERRLGINACKAVVYGKSPTPACCHRMRVTHLGCVCSVITPKLAALVDVNRMIELVKGCGRKLPRHYKCGSITFP
M043 Chain:A ((5-129))
AVSAAKCKEERRLGINACKAVVYGKSPTPACCHRMRVTHLGCVCSVITPKLAALVDVNRMIELVKGCGRKLPRHYKCGSITFP
General information:
TITO was launched using:
RESULT:
Template:
M043.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27579 for 568 contacts (-48.6/contact) +
2D Compatibility (PS) -7778 + (NN) 1223 + (LL) 0
1D Compatibility (HY) 2400 + (ID) 100
Total energy: -31834.0 ( -56.05 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_M043.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M043-query.scw
PDB file :
Tito_Scwrl_M043.pdb
: