Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------MHKILILLLII-LPIKLLAVEIEIIADVNGEPISNLDIEKRINLTH-----------------------SLFGTQSIDKNELKLQILKQLIDEIIIINEAQ----------RLNIKLSDEELSNAVVLFLTQSFKLK-------------DNEVD---QYAKEHNIGLNIL---------KRQI-E-CQLLWDK-------------------IIE------VRIVPFINISDKE-------------------VNNAKGQIE-KPDYLITFQEFIIPNQKDADVYGIAEDLVEKLRNNNNDFIP----------EAPIKMRKVTVNLNQLKG---------------NLKSILEGLKT---------------GDIAGPVSSSEDYSIVKVIDKVQLDHAMLESTLKLKQIVVKDSESLLDNLKEQ-KVN-----CLNFDELADNFNLPNAKEFEIKMRDLNPDLQALFSKTSVNEIIESRENSTARLMML---CDIKNNVVDAEATKQQIYQQKIMTQSNLLLDNLRKNAAVSYQYS |
5CD6 Chain:A ((2-580)) | QTTGVVCEEFDQIQLTHVLTPTGPLPTALDPNGVYPYMSYSETSNRPVPKRYRMISLENEKVKAIICPDLCGKVISLTHKESGKEVLYRPDVIKYTRILPRFYFVAGGIEVSFPISHSPTQNEPVLYQIDHTGDRTYVTCGERESHYGMQWSVEYSLGDKDECLTQRVVYYNPGKQAYPWMSWSNAALPCAPDTQYDFPNGTVLSHASTLDTIDWKTEGTHHERDIKEMTGYFWKTKDVNAFGAYTPSLGSGLYHIADESSTPGIKLWSYGVAGDKEWSMLSTPDRQPYVEIQGGPISDQSIKLELRPGEKKNHVEYWIPTDHPLDIYSLK---VPALRLRPIDRIPLFDWARKNESSIWIALADAYKNKSTLPAAPYPEDGQWAPSGMEDLDDAFRWAIQISPRPERDYWQFHYGTWLAGRERVEEAIEQLSIPD-IDLAKALL-ARLYVRRQAWEKARDTYAAIPETSWLNLHPQLVIERDKVLKKFGTEALPEREKWLDKINASSDEWVVERKVQLLIDKKQYQEAKDLLLSTHFQKVHQTYTRTGLWEQINEGLGLSPQPVP-EQLGEDRLARFEYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 93644 for 2265 contacts (41.3/contact) +
2D Compatibility (PS) -36851 + (NN) 19521 + (LL) 548
1D Compatibility (HY) 26800 + (ID) 900
Total energy: 102762.0 ( 45.37 by residue)
QMean score : 0.036
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