Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARNYYEILEY---V-APEEINKAYKRLGLKCHPDKLLP------KKRKISRIVKKAINGAALSKLELEEMQSL
2QSA Chain:A ((15-77))
--ENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVI-ATAYE--TLKDDEAKTNYDY
General information:
TITO was launched using:
RESULT:
Template:
2QSA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12224 for 300 contacts (-40.7/contact) +
2D Compatibility (PS) -5531 + (NN) -3275 + (LL) 516
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -24114.0 ( -80.38 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_2QSA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QSA-query.scw
PDB file :
Tito_Scwrl_2QSA.pdb
: