Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFVIATFYHFVKLSNYYDMKDEIKAACDNFELKGTILLAEEGINATISGERNAINKIFNFLCSDYRLKDLTWKESAAKYQPFSKMKVRLKREIVNLGVSNLDTSLRGKYIDPDHWDDFIS--QPDVLVIDTRNEYEVKLGKFKNAINPYIQYFREFPQWAKSFSKNKNLKVAMYCTGG--IRCEKSTAYMKSLGFNDVYHLKGGILSYLERTHNKNGNWEGECFVFDDRIAINSSLAPSNKIKCIFCSNQVSADELKSVSRGQVVCSDCNPS |
| 3NHV Chain:A ((15-117)) | -----------------------------------------------------------------------------------------------------------SYETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTK----RLSKEKVIITYCWGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEGTLGAKADLFWNMKKE---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NHV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40399 for 745 contacts (-54.2/contact) +
2D Compatibility (PS) -10817 + (NN) -3887 + (LL) 10296
1D Compatibility (HY) -800 + (ID) 1150
Total energy: -46757.0 ( -62.76 by residue)
QMean score : 0.461
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