Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSSDLWNFFTEVPSEGYIVESSYCTDSGCSNYIGNIDLSNIREFNLVSPDRKITKKFEANIIDFFEPRVHLSMDDSGKKINLDIAPENCSAT---KDGFLCIDKNEQDYKLKILIKKS---------------------------------------------------------------------------------- |
| 4NOM Chain:A ((26-432)) | EDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVTPENFLAVLRGDAEAVKGKGSGKVLKSGPRDHVFIYFTDHGATGILVFPNDDLHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNHLPDDINVYATTAANPKESSYACYYDEERGTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNTSHVMQY-GNKSISTMKVMQFQGMKHRASSPIS------LPPVTHLDL-TPSPDVPLTILKRKLLRTNDVKESQNLIGQIQQFLDARHVIEKSVHKIVSLLAGFGETAERHLSERTMLTAHDCYQEAVTHFRTHCFNWHSVTYEHALRYLYVLANLCEAPYPIDRIEMAMDKVCL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15728 for 546 contacts (28.8/contact) +
2D Compatibility (PS) -10696 + (NN) 1042 + (LL) 656
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: 2430.0 ( 4.45 by residue)
QMean score : 0.009
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