Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYTQLFISVIALVISLFAGYKVVKHQPQSVLNIKVAIIDSDKVINESLALHNIQQQIKEQNSKLQQEFENELDKLKPSKEELELLSEEAKKERAEQFNKLALNARDNYTKKMSYLEESYRDAVDSVFNKIKEVAKKTAEKNNIDLVLFISKKNQVLYSMNEIDLSDVVLKNINKEIPEFTLKGVN |
| 3R66 Chain:A ((7-102)) | -----------------TTQIEVGPGATNATINFEAGILECYERFSWQRAL---DYPGQDRLHRLKRKLESRIKTHNKSEPENKRMSLEERKAIGVKMMKVLLFM--DPSAGIEGFEP-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23600 for 556 contacts (42.4/contact) +
2D Compatibility (PS) -10270 + (NN) -1238 + (LL) 7520
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 16862.0 ( 30.33 by residue)
QMean score : 0.153
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