Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLSQYYLPTLKEKPAHARIISHQYSLR-AGLIKQ-IASGIYTWLPLGLRVLKNIEGIIRDEMNKSGAIEALMPCVQPASLWRESGRYDDYGKTMLRIRDRH----EEDMLFGPTHEEVATDLIRDIVKSYKNLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFNVNYESALNSYNLMYKTYIKIFKRMG-LIPIGVRADTGLIGGNLSHEFHILASTGESTLYYDNKFFELLESEDVKSLKSIYAVADDIHDPKTCPVPQEQLNVSKGIEIGHIFYFGDKYSKPMNAKVTAQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGITWPEAVAPFRVGLINLQTKT--AEYVEIANKIYSTLKS--DEVLYDDTE-GSIGVKFAKMDLIGLPWQIIVGKKAVSENIIEIKNRATGKVEEVQIEEAINYFNVK |
| 1HC7 Chain:A ((15-382)) | -------------------SEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFL--------FSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRT-RPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEG-LK-------TEKEK-----------F-AG--AVYTTTIEA-----------------LMK-------DGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLS-WRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGG-KETLPLAALPEALPGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HC7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217064 for 2759 contacts (-78.7/contact) +
2D Compatibility (PS) -36905 + (NN) -4669 + (LL) 4356
1D Compatibility (HY) -17600 + (ID) 3700
Total energy: -275582.0 ( -99.88 by residue)
QMean score : 0.460
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