Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRGIGTDIVYIPRILRILQKYGKKFLNKIYTEQEIEISRKYNSQEMQAKYLAKRFAAKEAFVKALG-GFSHGIIMKDIEIYNDVRGKPHLTVSKNFIFKDHMIHLSLSDDGDCATAFVIICSSLP
1F7L Chain:A ((1-118))
GIYGIGLDITELKRIASMAGRQ-KRFAERILTRSELDQYYELS-EKRKNEFLAGRFAAKEAFSKAFGTGIGRQLSFQDIEIRKDQNGKPYIICTKLS---PAAVHVSITHTKEYAAAQVVIER---
General information:
TITO was launched using:
RESULT:
Template:
1F7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87125 for 861 contacts (-101.2/contact) +
2D Compatibility (PS) -13215 + (NN) -6204 + (LL) 208
1D Compatibility (HY) -5200 + (ID) 2100
Total energy: -113636.0 ( -131.98 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_1F7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F7L-query.scw
PDB file :
Tito_Scwrl_1F7L.pdb
: