Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFLALPALFLWLLNWTLVKEIWRFNDLMQEAPEEERQLIIYRLVDTLPFITQTTYDLSAVASVNLSVNKLIEKYGENLSKDGFYTQLNRENTTNIEGYIKQSNEFKAEEKSHALKCLGFINRIEDKFQDNCSKLTLKQADILY----------------------------------------------- |
5A61 Chain:A ((2-430)) | AMAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICELELELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAAFELALAQWQYHEELWVRGNDAAKEQVLAAIGLVRHALML-------------FGGIV---PRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKL--ALTEWLVSKAWQPFLDAKAQGKISDSFKRFADIHLSRHAAELKSV-FCQPLGDRYHDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQGLRHAIATGQRIEIEHFRNEANNQEPFWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A61.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15143 for 764 contacts (-19.8/contact) +
2D Compatibility (PS) -13050 + (NN) -7215 + (LL) 2136
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -41822.0 ( -54.74 by residue)
QMean score : 0.303
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