Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MAHIPVLLKEMLLQLSPQNGGIYVDATFGAG---------GYSKAILESAD-CKVYAIDRDKTVIKFYEDLNIK------YPSRVKLFIEK-----FSNIRSILDSN--SLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPS--------NTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNS--SHTNASTFVNALRE-----EEIANTIYNYGGERHS----RRIARAIVNARK--------KKTIKTTFEL--ANIVRSVVFRGKSKIDPATRTFQAIRIW-------------------VNDELGELEKGIKAASEIL--NKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNK-----KMIKASAEEVNANPRSRSAKLRAIQRLS- |
| 4O7O Chain:A ((6-454)) | TLATKLPWSDWLSRQRWYAGRNRELATVKPGVVVALRHNLDLVLVDVTYTDGATERYQVLVGWDKAAIGVADDRTGFDALYDVAGPQFLLSLIVSSAVCGTSTGEVTFTREPDVELPFAAQPRVCDAEQSNTSVIFDRRAILKVFRRVSSGINPDIELNRVLTRAGNPHVARLLGAYQFGDALAYALGMVTEYEANAAEGWAMATASVRDLFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADSLGTAQATFPVDRMLARLSSTVAVVPELREYAPTIEQQFQKLAAEAITVQRVHGDLHLGQVLRTPESWLLIDFEGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVYETGYETRHRPGWLPIPLRSIARLTA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10427 for 2201 contacts (-4.7/contact) +
2D Compatibility (PS) -35027 + (NN) -6375 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 3050
Total energy: -60879.0 ( -27.66 by residue)
QMean score : 0.223
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