Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MAAHCYIKKLKLSNFRNHLNFELDSDDSSVVIIGKNGIGKTNILEAISLLAKSNGMKKAKASEMQNRFSNKDWAVHYDFFNGADLNSIGIAKSFNKKLIQIGGKMQSSYSSLYRISNVIWLIPQMDYILLNSPSDRLKFLDRIVSLFEENYACYYMRYRKAKRERGRLLRENILNKSWLSSLENIMAVNAVNILDMRLSVLKMLQDTINSYSTQFFPKVSLKFNSQLTLSDTAKYFQNRLRENREKDSLTGRITFCVNNDKFQVFCQRRDLPINLCSTGEQKLLLLSIILSSVKARCIHYNKAPLLLLDDIMSHLDKYYRKVLIEEMLSIRCQAWITDVDQNNFGNYIDYFKTIEL |
| 2PJZ Chain:A ((1-261)) | MIQLKNVGITLSGKGYERFSLEN---INLEVNGEKVIILGPNGSGKTTLLRAISGLLPYSG---------------------NIFINGMEVRKI-------RNYIRYSTNLPEAYEIGVTVNDIVYLYEELK----GLDRDLFLEMLKALKLGEEILRRKLYKLSAGQSVLVRTSLALASQPEIVGLDEPFENVDAARRHVISRYIKEYGKEGILVT-----------------------------HELDMLNLYKEYKAYFLVGNRLQGPISVSELLESSIVEGERNDALLVLDIMDKKVSIVKGD---LGMKFGALGSLNRIYGII---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64891 for 2038 contacts (-31.8/contact) +
2D Compatibility (PS) -26339 + (NN) 3942 + (LL) 7664
1D Compatibility (HY) -12000 + (ID) 2200
Total energy: -93824.0 ( -46.04 by residue)
QMean score : 0.217
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