Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTLNTPKVDFNFTAKNFNLLGVDNKYYTLSD-CCGKNGFIVMFICNHCPYVQSIISNLISDVDLLKKDYQVNTIAI-MPNDVNEYPEDSFENMINFAKENKFTFPYLID---SKQEVAKEYGAVCTPDFFGFNANLNLCYRGRFNDAKKEKIQNYEIGSSNLFQAMKFIAETGNSPINQKSSIGCSIKWSNSTG
3FW2 Chain:A ((3-150))
------AKSEIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWND--SISQKQSNSELREIYKKYKKNKYIGMLGISLDV----DKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDG--------------KILAKNLRGEELKKKIENIVEEA---------------------
General information:
TITO was launched using:
RESULT:
Template:
3FW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97036 for 1077 contacts (-90.1/contact) +
2D Compatibility (PS) -15345 + (NN) -4310 + (LL) 1720
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: -117771.0 ( -109.35 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_3FW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FW2-query.scw
PDB file :
Tito_Scwrl_3FW2.pdb
: