Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVVLSGYGLNC--EKETAFAFVECGRKLGVNNIEVRIVHINE----------------IIKNPGELRLSNILAIPGGFSYGDDTGAGNAFALRVKNNLLDKFQEFLSQDKLVIGICNGCQILAKLIPEFSNLALIRNDIGNYQCRWIKVKVSPQSSSVWLQDL-NELYLPIAHGEGKFFMNQGVLDQLI-ENNSVALRYINESGDYANLQFPYNPNGSTYDLAALSDKSGRVLALMPHPERGIFFTQQDNWPLEKEKCKRLKIAMPKYGDGMLIFENALRYFC |
| 2H2W Chain:A ((36-243)) | LEILILNLMPDKIKTEIQLLRLLGNTPLQVN-----VTLLYTETHKPKHTPIEHILKFYTTF-SAVKDRKFDGFIITGAPVELLPFE-----EVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYGI----PKYEL-PQKLSGVYKHRVAK--DSVLFRGHDDFFWAPHSRYTEVKK------EDIDKVPELEILAESD--------------E---AGVYVVANKSERQIFVTGHPEYDRYTLRDEYYRDIGRNLKVPIPANYFPNDDPTKTPILTWWSH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H2W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97435 for 1440 contacts (-67.7/contact) +
2D Compatibility (PS) -20496 + (NN) -7147 + (LL) 1520
1D Compatibility (HY) -800 + (ID) 1150
Total energy: -125508.0 ( -87.16 by residue)
QMean score : 0.346
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