Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRTQYNNLV----------SSYARALFLVSENKLSVVRKEVEFLLAFFKSQHD----VFIYLSHPMISFARKKE------VIFSVNE------HLSESLVKFIAV-------IFANKRSNLLIS-----------VLEKFLTLVRESENELEITI-------------------KSAETLSESNIKIITESLSFLGKI------VRVDNAVDPSILGGFIVKYGFNL---------IDASLKSYLD---RLVDLS------KVEILKTRNFI----- |
| 3G8Q Chain:A ((1-278)) | MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTARPCLYCARELAEAGVAGVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPENLSGRVEIMVTRGDPDEAVELLKEELPVFRIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEVFIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88273 for 1275 contacts (-69.2/contact) +
2D Compatibility (PS) -20331 + (NN) -7041 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 2000
Total energy: -127645.0 ( -100.11 by residue)
QMean score : 0.245
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