Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MLSPCPRAKVCFSPGEDCAVLIISEIDQSKESVLVQEYTFTLE---TIARALINAKERSVDVEVIL--DKSQLHSKYSVINKLFSNGIPVWIDDKPKIAHNKVIIVDN---QKVITGSFNLTKTAKKGNAENLLIIKNYPELVQQYVKNWEIRKSQSYKYAS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2C1L Chain:A ((1-358)) | MNFFSLHPNVYATGRPK-----GLIGMLENVWVSNHTPGEGTLYLISGFSNYNGGVRFYETFTEHINQGGRVIAILGGSTSQRLSSRQVVEELLNRGVEVHIINRKRILHAKLYGTSNNLGESLVVSSGNFTGPGMSQNIEASLLLDNNTTQSMGFSWNDMISEMLNQNWHIHNMTNATDASPGWNLLYDERTTNLTLDETERVTLIVTLGHADTARIQAAPGTTAGQGTQYFWLSKDSYDFFPPLTIRNRRGTKATYSSLINMNYIDINYTDTQCRVTFEAENNFDFRLGTGKLRYTGVAKSNDIAAITRVGDSDYELRIIKQGTPEHSQLDPYAVSFIGNRGKRFGYISNEEFGRIIGVTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47685 for 1120 contacts (-42.6/contact) +
2D Compatibility (PS) -15729 + (NN) -475 + (LL) 588
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -69001.0 ( -61.61 by residue)
QMean score : 0.424
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