Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFIQIEETPNPNTLKFLPGFAILNERETADFSNPDEIKNSKLAADLFQIEHVIRVFFGHDFISVTKSDGISWDILKVEILTTVMDHFTSGGKALDRKGVNDNNIPDEEFFDENDIEI-VNRIKELMENYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLCYHIPEVSGIETTL
1TH5 Chain:A ((153-226))
-----------------------------------------------------------------------------------------------------------------MLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAAVV----RTVRIAVSKKLREKIPSIQIVQLLS
General information:
TITO was launched using:
RESULT:
Template:
1TH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52350 for 496 contacts (-105.5/contact) +
2D Compatibility (PS) -7882 + (NN) -3463 + (LL) 6736
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -61709.0 ( -124.41 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1TH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TH5-query.scw
PDB file :
Tito_Scwrl_1TH5.pdb
: