Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLEKIQSDVEDIWKNRSKLSNRSVKRAARVIIKKVIKLLDSGKIRVAERLSDGKWIVHTWIKQAISLYFLTEESKMIDHTGWWFDKVNNKFDGWNEEEFHQSKIRAVPGCFVRQSAYVGTNVVLM-PSFINVG---AYISSGTMIDTWSTIG-SCAQIGKNCHVSGGVGIGGVLEPIQASPVIIEDNCFIGARSEVAEGVIIREGSVLGMGVFIGASTKIIDRETNKVFYGEVPPYSVVVPGSTLSANNISIYCAIIVKKVDEKTRQKTSINEILRD
3IXC Chain:A ((37-168))
-----------------------------------------------------------------------------------------------------DSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTGDTVIGKFVTIGHSCILHA---------CTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTRGK-------------IVKSGELWAG----------RPAKFLRMMTEEEILYLQKSAENYIA
General information:
TITO was launched using:
RESULT:
Template:
3IXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166292 for 1019 contacts (-163.2/contact) +
2D Compatibility (PS) -14175 + (NN) -9750 + (LL) 9904
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -184913.0 ( -181.47 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3IXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IXC-query.scw
PDB file :
Tito_Scwrl_3IXC.pdb
: