Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKILISLLFILIFYSSANAFTLDDKLRDKNMEKRATNLFEMIKCPICSGESLSESGSQVAYNMRKMIREKISDGYTDEQITSELRNSYGDSIIIVPPV--KFSTYILWLIPLVIPLIGCFLIRNIIK------------------ |
1TVL Chain:A ((3-432)) | RADFIQFGAMIHGVGGTTDGWRHPDVDPSASTNIEFYMKKAQTAEKGLFSFIFIADGLFISEKSIPHFLNRFEPITILSALASVTKNIGLVGTFSTSFTEPFTISRQLMSLDHISGGRAGWNLVTSPQEGAARNHSKSNLPEHTERYEIAQEHLDVVRGLWNSWEHDAFIHNKKTGQFFDQAKLHRLNHKGKYFQVEGPLNIGRSKQGEPVVFQAGSSETGRQFAAKNADAIFTHSNSLEETKAFYADVKSRAADEGRDPSSVRIFPGISPIVA-DTEEEAEKKYREFAELIPIENAVTEAKA------RNLTLREVAQEMAFPRTLFIG---TPERVASLIETWFNAEAADGFIVGSDIPGTLDAFVEKVIPILQE-------RGLYRQDYRGGTLRENLGLGIPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42797 for 704 contacts (-60.8/contact) +
2D Compatibility (PS) -10980 + (NN) 2777 + (LL) 1724
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -53576.0 ( -76.10 by residue)
QMean score : 0.069
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