Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISKEDLLELMKIRHSRRSYGQSKLAHQEEINMLIETAWLSPSRYGDEPWRQVICNRQSNQDAWEKLLSCPTEPNQKWAKDTQILIISLSTKNFHDHTKIVNFWGSHDTGIANYTFMLQSYIYEFNAHQMSRFDRNKIVKNSIYQMILI
3GE5 Chain:A ((26-157))
--DFRLIEDFFRTRRSVRKFID-RPVEEEKLMAILEAGRIAPSAHNYQPWHFLVVREE---EGRKRLAPCS---QQPWFPGAPIYIITLGDHQRAW-KRGAGDSVDIDTSIAMTYMMLEAHSLGLGCTWVCAFDQALCSEIFDIPSHMT
General information:
TITO was launched using:
RESULT:
Template:
3GE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25857 for 867 contacts (-29.8/contact) +
2D Compatibility (PS) -13873 + (NN) -2733 + (LL) 456
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -48057.0 ( -55.43 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_3GE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE5-query.scw
PDB file :
Tito_Scwrl_3GE5.pdb
: