Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHDKFDNVTFTINGTRESLFNFVFCEDQCTELSVQKTLDYLRARNIEATWVMNSHTKTQGILEKCGIKHVSTPKKVLLNMKNYFLPADVVPGLKLNAVTSSNLLKQLDSYTSKIFHHSIGIV----S-TFFRGLSNYDDKNSGLRFFLVTLNDEIIGTCGFYIQ----------DSVAGFYSDGVLPIYRNRGIGTQMVLDRIKIIQQLECKHVVAHCMKPSVNLYKRLGFQILGNLYLYTSSA |
3MGD Chain:A ((2-148)) | --------------------------------------------------------------------------------------------MNYRKA-DMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKL-ANNLLVEWIAEENNQIIATAAIAFIDFPPTYTNKTGRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLVASKLGRPVYKKYGFQDTDEWLELNLLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93671 for 900 contacts (-104.1/contact) +
2D Compatibility (PS) -14135 + (NN) -2463 + (LL) 6224
1D Compatibility (HY) -400 + (ID) 1100
Total energy: -105545.0 ( -117.27 by residue)
QMean score : 0.403
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