Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDNIIIITGITASGKSELCDNLIKKYGNISIVNCDSKQVYKEIPIITAQPPKQE---EFYRLYGCVPAKENYSVGLWLEDLKGEVDHALENARMPIITGGSGLYISSLINSLSPIPKVSE-EIRKNVSELRKNLSKEEFYKLVLSKDSKIQGKISTNDLHRLSRALEVITATGKSIFVWQESRQLPLFDN-FKIYTILPKREDVYRKINSRFVTMIESGAVDEVKKLLNMNL-------APHLPAMRAHGVPEIIKYLKGKI-TLSEAIQIAQTNTRHYAKRQYTWFKNQFPNSEVIDCANKLIEFEIF |
| 3EPH Chain:A ((1-292)) | -SKKVIVIAGTTGVGKSQLSIQLAQ-KFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERKLTRKQLD-ILESTDPDVIYNTLVKCDPDIATKYHPNDYRRVQRMLEIYYKTGKKPSETFNEQKI-TLKFDTLFLWLYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQCENGVWQVIGFKEFLPWLT---VKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLDATDLSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127062 for 2048 contacts (-62.0/contact) +
2D Compatibility (PS) -29232 + (NN) -16739 + (LL) 332
1D Compatibility (HY) -16800 + (ID) 3750
Total energy: -193251.0 ( -94.36 by residue)
QMean score : 0.525
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