Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQSILRLLYITAVLTRYNISPYLLSPSRKSINRIRGYKLRCAFEKLGPVFIKFGQSISSRTDILNEDITNNLLLICDKLPSFSHKIAVKTIESEFNCKLSDIFSSFSEKPIAAASISQAHKATTT-EGKEVAVKILRPNIEKTFSKDIKMLFWLAGIVEKFSKQSRRLKPIELVETFAEICRLELDLRFEAAHSSELRENTKNDRGFYVPEVDWSRTSKRVLTLEWIGATPVYEVEKLN-------NHKQIAINLIESFCNQVYRDCFFHADMHPGNLMIDS--NNSIVALDCGIMGRIDRETCYYVIEILKGFLNRDYDRVAKVHFRAGYVSPQHKSFVTACRAIGEPIIGQPIQKISFASLLAQLLKITGDFDMKVQTQLLLLQKTMILLEGTCRKIYP--EINVWKVVEAWTENQHKNKISYKERIKSSYPVKTIQEIFNLIEKLNLIANQKLENIQIKDRSNGKIYFLLWSMVIALIVKLLIFL |
| 1KOB Chain:A ((57-307)) | -------------------------------------------------------------------------------------------------------------EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD----------------------------------------KYTVKNEISIMNQLH----HPKLINLHDAFE-DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG-LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-----------------VKVTTATAEFAAPEI---------VDREPVGFYTDMWAIGVLGYVLLSGLSPFAG--EDDLETLQNVK----RCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48990 for 1765 contacts (-27.8/contact) +
2D Compatibility (PS) -25446 + (NN) -9555 + (LL) 15384
1D Compatibility (HY) -7200 + (ID) 1550
Total energy: -77357.0 ( -43.83 by residue)
QMean score : 0.306
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